Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb22Q91XZ8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb22Q91XZ8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb22Q91XZ8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb22Q91XZ8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb22Q91XZ8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb22Q91XZ8 Gm13158-201ENSMUST00000122007 736 ntBASIC21.02■□□□□ 0.96
Pcdhb22Q91XZ8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb22Q91XZ8 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.02■□□□□ 0.96
Pcdhb22Q91XZ8 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.02■□□□□ 0.96
Pcdhb22Q91XZ8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb22Q91XZ8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhb22Q91XZ8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhb22Q91XZ8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhb22Q91XZ8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.01■□□□□ 0.95
Pcdhb22Q91XZ8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb22Q91XZ8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pcdhb22Q91XZ8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb22Q91XZ8 Fam105a-203ENSMUST00000226170 3043 ntBASIC21■□□□□ 0.95
Pcdhb22Q91XZ8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb22Q91XZ8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pcdhb22Q91XZ8 Gm20760-201ENSMUST00000179197 648 ntBASIC21■□□□□ 0.95
Pcdhb22Q91XZ8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pcdhb22Q91XZ8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pcdhb22Q91XZ8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb22Q91XZ8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb22Q91XZ8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb22Q91XZ8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Pcdhb22Q91XZ8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb22Q91XZ8 Mir2861-201ENSMUST00000175539 82 ntBASIC20.99■□□□□ 0.95
Pcdhb22Q91XZ8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb22Q91XZ8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb22Q91XZ8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb22Q91XZ8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb22Q91XZ8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhb22Q91XZ8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb22Q91XZ8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Mir6349-201ENSMUST00000184059 97 ntBASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Grk6-206ENSMUST00000224995 2971 ntBASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb22Q91XZ8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb22Q91XZ8 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.97■□□□□ 0.95
Pcdhb22Q91XZ8 Gm18666-201ENSMUST00000190039 958 ntBASIC20.97■□□□□ 0.95
Pcdhb22Q91XZ8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhb22Q91XZ8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb22Q91XZ8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb22Q91XZ8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb22Q91XZ8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb22Q91XZ8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb22Q91XZ8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.96■□□□□ 0.95
Pcdhb22Q91XZ8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb22Q91XZ8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb22Q91XZ8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb22Q91XZ8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Pcdhb22Q91XZ8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.96■□□□□ 0.95
Pcdhb22Q91XZ8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pcdhb22Q91XZ8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhb22Q91XZ8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.96■□□□□ 0.95
Pcdhb22Q91XZ8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb22Q91XZ8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb22Q91XZ8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb22Q91XZ8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb22Q91XZ8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Pcdhb22Q91XZ8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb22Q91XZ8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb22Q91XZ8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb22Q91XZ8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb22Q91XZ8 Gm15375-201ENSMUST00000119510 849 ntBASIC20.95■□□□□ 0.94
Pcdhb22Q91XZ8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb22Q91XZ8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb22Q91XZ8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb22Q91XZ8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb22Q91XZ8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb22Q91XZ8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms