Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga11Q91XY8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga11Q91XY8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Nespas-201ENSMUST00000143738 1083 ntBASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhga11Q91XY8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga11Q91XY8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga11Q91XY8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga11Q91XY8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.33■□□□□ 0.37
Pcdhga11Q91XY8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga11Q91XY8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pcdhga11Q91XY8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga11Q91XY8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga11Q91XY8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.33■□□□□ 0.36
Pcdhga11Q91XY8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.33■□□□□ 0.36
Pcdhga11Q91XY8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdhga11Q91XY8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga11Q91XY8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhga11Q91XY8 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.33■□□□□ 0.36
Pcdhga11Q91XY8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdhga11Q91XY8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga11Q91XY8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga11Q91XY8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga11Q91XY8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga11Q91XY8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhga11Q91XY8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga11Q91XY8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdhga11Q91XY8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhga11Q91XY8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhga11Q91XY8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga11Q91XY8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga11Q91XY8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms