Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhga9Q91XX9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Gm10252-201ENSMUST00000209541 832 ntBASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhga9Q91XX9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga9Q91XX9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Tgds-204ENSMUST00000228543 1594 ntBASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhga9Q91XX9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga9Q91XX9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga9Q91XX9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga9Q91XX9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga9Q91XX9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga9Q91XX9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhga9Q91XX9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga9Q91XX9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga9Q91XX9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhga9Q91XX9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga9Q91XX9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga9Q91XX9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga9Q91XX9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga9Q91XX9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga9Q91XX9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga9Q91XX9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga9Q91XX9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhga9Q91XX9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga9Q91XX9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga9Q91XX9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga9Q91XX9 Gm12896-201ENSMUST00000118430 226 ntBASIC17.77■□□□□ 0.44
Pcdhga9Q91XX9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga9Q91XX9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhga9Q91XX9 Gm27275-201ENSMUST00000184318 272 ntBASIC17.77■□□□□ 0.44
Pcdhga9Q91XX9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga9Q91XX9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga9Q91XX9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Pcdhga9Q91XX9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga9Q91XX9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga9Q91XX9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga9Q91XX9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Pcdhga9Q91XX9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Flg-201ENSMUST00000050758 1488 ntBASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga9Q91XX9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms