Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdhgc3Q91XX1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgc3Q91XX1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhgc3Q91XX1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgc3Q91XX1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgc3Q91XX1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgc3Q91XX1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgc3Q91XX1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.98■□□□□ 0.31
Pcdhgc3Q91XX1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgc3Q91XX1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgc3Q91XX1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgc3Q91XX1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Pcdhgc3Q91XX1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgc3Q91XX1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgc3Q91XX1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgc3Q91XX1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgc3Q91XX1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgc3Q91XX1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Spcs1-204ENSMUST00000226782 949 ntBASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgc3Q91XX1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc3Q91XX1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc3Q91XX1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms