Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trex1Q91XB0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trex1Q91XB0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trex1Q91XB0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trex1Q91XB0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.69■□□□□ 0.9
Trex1Q91XB0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.69■□□□□ 0.9
Trex1Q91XB0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.69■□□□□ 0.9
Trex1Q91XB0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trex1Q91XB0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trex1Q91XB0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trex1Q91XB0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trex1Q91XB0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trex1Q91XB0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trex1Q91XB0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.69■□□□□ 0.9
Trex1Q91XB0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.68■□□□□ 0.9
Trex1Q91XB0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Gm10517-202ENSMUST00000192970 758 ntBASIC20.68■□□□□ 0.9
Trex1Q91XB0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trex1Q91XB0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trex1Q91XB0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trex1Q91XB0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trex1Q91XB0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trex1Q91XB0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trex1Q91XB0 Gm12085-201ENSMUST00000119263 940 ntBASIC20.67■□□□□ 0.9
Trex1Q91XB0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.67■□□□□ 0.9
Trex1Q91XB0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trex1Q91XB0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.67■□□□□ 0.9
Trex1Q91XB0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trex1Q91XB0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trex1Q91XB0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trex1Q91XB0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trex1Q91XB0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trex1Q91XB0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trex1Q91XB0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trex1Q91XB0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trex1Q91XB0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trex1Q91XB0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trex1Q91XB0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.66■□□□□ 0.9
Trex1Q91XB0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trex1Q91XB0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trex1Q91XB0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trex1Q91XB0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trex1Q91XB0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.65■□□□□ 0.9
Trex1Q91XB0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trex1Q91XB0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trex1Q91XB0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trex1Q91XB0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trex1Q91XB0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trex1Q91XB0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trex1Q91XB0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trex1Q91XB0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Trex1Q91XB0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trex1Q91XB0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trex1Q91XB0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trex1Q91XB0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trex1Q91XB0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.64■□□□□ 0.89
Trex1Q91XB0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trex1Q91XB0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trex1Q91XB0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trex1Q91XB0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trex1Q91XB0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trex1Q91XB0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trex1Q91XB0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trex1Q91XB0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trex1Q91XB0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trex1Q91XB0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trex1Q91XB0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trex1Q91XB0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.62■□□□□ 0.89
Trex1Q91XB0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trex1Q91XB0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trex1Q91XB0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Trex1Q91XB0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trex1Q91XB0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trex1Q91XB0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms