Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TraipQ8VIG6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TraipQ8VIG6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TraipQ8VIG6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TraipQ8VIG6 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.16■□□□□ 0.66
TraipQ8VIG6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TraipQ8VIG6 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.16■□□□□ 0.66
TraipQ8VIG6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
TraipQ8VIG6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TraipQ8VIG6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TraipQ8VIG6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TraipQ8VIG6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TraipQ8VIG6 Gm6433-201ENSMUST00000118634 875 ntBASIC19.15■□□□□ 0.66
TraipQ8VIG6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TraipQ8VIG6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TraipQ8VIG6 Gm7977-201ENSMUST00000193787 748 ntBASIC19.15■□□□□ 0.66
TraipQ8VIG6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TraipQ8VIG6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TraipQ8VIG6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TraipQ8VIG6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TraipQ8VIG6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.14■□□□□ 0.66
TraipQ8VIG6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TraipQ8VIG6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TraipQ8VIG6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TraipQ8VIG6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TraipQ8VIG6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TraipQ8VIG6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TraipQ8VIG6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TraipQ8VIG6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TraipQ8VIG6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TraipQ8VIG6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
TraipQ8VIG6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TraipQ8VIG6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TraipQ8VIG6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TraipQ8VIG6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TraipQ8VIG6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TraipQ8VIG6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TraipQ8VIG6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TraipQ8VIG6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TraipQ8VIG6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TraipQ8VIG6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TraipQ8VIG6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TraipQ8VIG6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TraipQ8VIG6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TraipQ8VIG6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TraipQ8VIG6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.12■□□□□ 0.65
TraipQ8VIG6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TraipQ8VIG6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TraipQ8VIG6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TraipQ8VIG6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TraipQ8VIG6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.12■□□□□ 0.65
TraipQ8VIG6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TraipQ8VIG6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TraipQ8VIG6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TraipQ8VIG6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
TraipQ8VIG6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TraipQ8VIG6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TraipQ8VIG6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TraipQ8VIG6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TraipQ8VIG6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TraipQ8VIG6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TraipQ8VIG6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.11■□□□□ 0.65
TraipQ8VIG6 Gm30025-201ENSMUST00000218555 728 ntBASIC19.11■□□□□ 0.65
TraipQ8VIG6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TraipQ8VIG6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TraipQ8VIG6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TraipQ8VIG6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TraipQ8VIG6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TraipQ8VIG6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TraipQ8VIG6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.11■□□□□ 0.65
TraipQ8VIG6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Gm43799-201ENSMUST00000201845 579 ntBASIC19.1■□□□□ 0.65
TraipQ8VIG6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TraipQ8VIG6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TraipQ8VIG6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TraipQ8VIG6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TraipQ8VIG6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TraipQ8VIG6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TraipQ8VIG6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TraipQ8VIG6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms