Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim60Q8VI40 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim60Q8VI40 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim60Q8VI40 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim60Q8VI40 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim60Q8VI40 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim60Q8VI40 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim60Q8VI40 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim60Q8VI40 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim60Q8VI40 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim60Q8VI40 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Trim60Q8VI40 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.63■□□□□ 0.57
Trim60Q8VI40 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim60Q8VI40 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim60Q8VI40 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim60Q8VI40 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim60Q8VI40 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim60Q8VI40 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim60Q8VI40 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim60Q8VI40 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.62■□□□□ 0.57
Trim60Q8VI40 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim60Q8VI40 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim60Q8VI40 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trim60Q8VI40 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim60Q8VI40 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim60Q8VI40 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim60Q8VI40 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim60Q8VI40 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim60Q8VI40 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.6■□□□□ 0.57
Trim60Q8VI40 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim60Q8VI40 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim60Q8VI40 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim60Q8VI40 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.6■□□□□ 0.57
Trim60Q8VI40 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim60Q8VI40 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim60Q8VI40 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim60Q8VI40 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.59■□□□□ 0.57
Trim60Q8VI40 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim60Q8VI40 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim60Q8VI40 Gm10493-201ENSMUST00000097270 612 ntBASIC18.59■□□□□ 0.57
Trim60Q8VI40 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim60Q8VI40 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.59■□□□□ 0.57
Trim60Q8VI40 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim60Q8VI40 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim60Q8VI40 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim60Q8VI40 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim60Q8VI40 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.58■□□□□ 0.57
Trim60Q8VI40 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim60Q8VI40 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim60Q8VI40 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.58■□□□□ 0.56
Trim60Q8VI40 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trim60Q8VI40 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim60Q8VI40 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim60Q8VI40 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trim60Q8VI40 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms