Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Rab3c-203ENSMUST00000224180 967 ntBASIC22.43■■□□□ 1.18
HnrnpuQ8VEK3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
HnrnpuQ8VEK3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HnrnpuQ8VEK3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HnrnpuQ8VEK3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HnrnpuQ8VEK3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC22.43■■□□□ 1.18
HnrnpuQ8VEK3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HnrnpuQ8VEK3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HnrnpuQ8VEK3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HnrnpuQ8VEK3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HnrnpuQ8VEK3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HnrnpuQ8VEK3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HnrnpuQ8VEK3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HnrnpuQ8VEK3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HnrnpuQ8VEK3 Gm2399-201ENSMUST00000104944 225 ntBASIC22.42■■□□□ 1.18
HnrnpuQ8VEK3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HnrnpuQ8VEK3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.42■■□□□ 1.18
HnrnpuQ8VEK3 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.42■■□□□ 1.18
HnrnpuQ8VEK3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HnrnpuQ8VEK3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HnrnpuQ8VEK3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HnrnpuQ8VEK3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Gm5828-201ENSMUST00000071842 1860 ntBASIC22.41■■□□□ 1.18
HnrnpuQ8VEK3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Gm42939-201ENSMUST00000197514 2205 ntBASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
HnrnpuQ8VEK3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HnrnpuQ8VEK3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HnrnpuQ8VEK3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HnrnpuQ8VEK3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.39■■□□□ 1.17
HnrnpuQ8VEK3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HnrnpuQ8VEK3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
HnrnpuQ8VEK3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
HnrnpuQ8VEK3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HnrnpuQ8VEK3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
HnrnpuQ8VEK3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 Dmtn-207ENSMUST00000228001 2437 ntBASIC22.37■■□□□ 1.17
HnrnpuQ8VEK3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HnrnpuQ8VEK3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HnrnpuQ8VEK3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
HnrnpuQ8VEK3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms