Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lmcd1Q8VEE1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lmcd1Q8VEE1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Mir3081-201ENSMUST00000175305 84 ntBASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lmcd1Q8VEE1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Gm24589-201ENSMUST00000116692 94 ntBASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lmcd1Q8VEE1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lmcd1Q8VEE1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lmcd1Q8VEE1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.15■□□□□ 0.66
Lmcd1Q8VEE1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lmcd1Q8VEE1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Lmcd1Q8VEE1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lmcd1Q8VEE1 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.15■□□□□ 0.66
Lmcd1Q8VEE1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lmcd1Q8VEE1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lmcd1Q8VEE1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Lmcd1Q8VEE1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lmcd1Q8VEE1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Lmcd1Q8VEE1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lmcd1Q8VEE1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lmcd1Q8VEE1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.13■□□□□ 0.65
Lmcd1Q8VEE1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Lmcd1Q8VEE1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Lmcd1Q8VEE1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lmcd1Q8VEE1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lmcd1Q8VEE1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Lmcd1Q8VEE1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.12■□□□□ 0.65
Lmcd1Q8VEE1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lmcd1Q8VEE1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lmcd1Q8VEE1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Lmcd1Q8VEE1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lmcd1Q8VEE1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lmcd1Q8VEE1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lmcd1Q8VEE1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lmcd1Q8VEE1 Gm4974-201ENSMUST00000209974 875 ntBASIC19.12■□□□□ 0.65
Lmcd1Q8VEE1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lmcd1Q8VEE1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lmcd1Q8VEE1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lmcd1Q8VEE1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lmcd1Q8VEE1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Lmcd1Q8VEE1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms