Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Rprd1aQ8VDS4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rprd1aQ8VDS4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rprd1aQ8VDS4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rprd1aQ8VDS4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rprd1aQ8VDS4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rprd1aQ8VDS4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
Rprd1aQ8VDS4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Rprd1aQ8VDS4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rprd1aQ8VDS4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rprd1aQ8VDS4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rprd1aQ8VDS4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rprd1aQ8VDS4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Rprd1aQ8VDS4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rprd1aQ8VDS4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.5■□□□□ 0.55
Rprd1aQ8VDS4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Gm38285-201ENSMUST00000192928 922 ntBASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rprd1aQ8VDS4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rprd1aQ8VDS4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rprd1aQ8VDS4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rprd1aQ8VDS4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rprd1aQ8VDS4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rprd1aQ8VDS4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rprd1aQ8VDS4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rprd1aQ8VDS4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rprd1aQ8VDS4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rprd1aQ8VDS4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rprd1aQ8VDS4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rprd1aQ8VDS4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Gm13158-201ENSMUST00000122007 736 ntBASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Gm22240-201ENSMUST00000175225 82 ntBASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Gm18666-201ENSMUST00000190039 958 ntBASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Mtag2-201ENSMUST00000058665 714 ntBASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rprd1aQ8VDS4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rprd1aQ8VDS4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.46■□□□□ 0.55
Rprd1aQ8VDS4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rprd1aQ8VDS4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rprd1aQ8VDS4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rprd1aQ8VDS4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rprd1aQ8VDS4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rprd1aQ8VDS4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rprd1aQ8VDS4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rprd1aQ8VDS4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rprd1aQ8VDS4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rprd1aQ8VDS4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rprd1aQ8VDS4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rprd1aQ8VDS4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Rprd1aQ8VDS4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rprd1aQ8VDS4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rprd1aQ8VDS4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rprd1aQ8VDS4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Rprd1aQ8VDS4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rprd1aQ8VDS4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rprd1aQ8VDS4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rprd1aQ8VDS4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rprd1aQ8VDS4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rprd1aQ8VDS4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.45■□□□□ 0.54
Rprd1aQ8VDS4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 Gm5643-201ENSMUST00000117081 966 ntBASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rprd1aQ8VDS4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms