Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.55■□□□□ 0.4
Q8VDP2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.55■□□□□ 0.4
Q8VDP2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.55■□□□□ 0.4
Q8VDP2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Q8VDP2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Q8VDP2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8VDP2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8VDP2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.54■□□□□ 0.4
Q8VDP2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8VDP2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8VDP2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8VDP2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8VDP2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8VDP2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Q8VDP2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8VDP2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Q8VDP2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8VDP2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8VDP2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8VDP2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8VDP2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8VDP2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.53■□□□□ 0.4
Q8VDP2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q8VDP2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.53■□□□□ 0.4
Q8VDP2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8VDP2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8VDP2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.53■□□□□ 0.4
Q8VDP2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.53■□□□□ 0.4
Q8VDP2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Q8VDP2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Q8VDP2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.53■□□□□ 0.4
Q8VDP2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Q8VDP2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8VDP2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8VDP2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Q8VDP2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8VDP2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8VDP2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8VDP2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q8VDP2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8VDP2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Q8VDP2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8VDP2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8VDP2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Q8VDP2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8VDP2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8VDP2 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.52■□□□□ 0.4
Q8VDP2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q8VDP2 Etf1-202ENSMUST00000180351 108 ntBASIC17.52■□□□□ 0.4
Q8VDP2 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.52■□□□□ 0.4
Q8VDP2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8VDP2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Q8VDP2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8VDP2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8VDP2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8VDP2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8VDP2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q8VDP2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q8VDP2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q8VDP2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q8VDP2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8VDP2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Q8VDP2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8VDP2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Q8VDP2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q8VDP2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Q8VDP2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Q8VDP2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.51■□□□□ 0.39
Q8VDP2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q8VDP2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Q8VDP2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8VDP2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q8VDP2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8VDP2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q8VDP2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Q8VDP2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8VDP2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Q8VDP2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.5■□□□□ 0.39
Q8VDP2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8VDP2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.5■□□□□ 0.39
Q8VDP2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q8VDP2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8VDP2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q8VDP2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.5■□□□□ 0.39
Q8VDP2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.5■□□□□ 0.39
Q8VDP2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8VDP2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q8VDP2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8VDP2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Q8VDP2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms