Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.21■□□□□ 0.35
Rpusd1Q8VCZ8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpusd1Q8VCZ8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpusd1Q8VCZ8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpusd1Q8VCZ8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpusd1Q8VCZ8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpusd1Q8VCZ8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpusd1Q8VCZ8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpusd1Q8VCZ8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpusd1Q8VCZ8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rpusd1Q8VCZ8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rpusd1Q8VCZ8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpusd1Q8VCZ8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpusd1Q8VCZ8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpusd1Q8VCZ8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpusd1Q8VCZ8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpusd1Q8VCZ8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpusd1Q8VCZ8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.18■□□□□ 0.34
Rpusd1Q8VCZ8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.18■□□□□ 0.34
Rpusd1Q8VCZ8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpusd1Q8VCZ8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Gm7889-201ENSMUST00000185591 958 ntBASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.17■□□□□ 0.34
Rpusd1Q8VCZ8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpusd1Q8VCZ8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpusd1Q8VCZ8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpusd1Q8VCZ8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpusd1Q8VCZ8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpusd1Q8VCZ8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpusd1Q8VCZ8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rpusd1Q8VCZ8 Tgds-204ENSMUST00000228543 1594 ntBASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpusd1Q8VCZ8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpusd1Q8VCZ8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpusd1Q8VCZ8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.14■□□□□ 0.33
Rpusd1Q8VCZ8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpusd1Q8VCZ8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.14■□□□□ 0.33
Rpusd1Q8VCZ8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.14■□□□□ 0.33
Rpusd1Q8VCZ8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpusd1Q8VCZ8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpusd1Q8VCZ8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpusd1Q8VCZ8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpusd1Q8VCZ8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpusd1Q8VCZ8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpusd1Q8VCZ8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpusd1Q8VCZ8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms