Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3kbp1Q8R550 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3kbp1Q8R550 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3kbp1Q8R550 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.55■□□□□ 0.56
Sh3kbp1Q8R550 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sh3kbp1Q8R550 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3kbp1Q8R550 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3kbp1Q8R550 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sh3kbp1Q8R550 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3kbp1Q8R550 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3kbp1Q8R550 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3kbp1Q8R550 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3kbp1Q8R550 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3kbp1Q8R550 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3kbp1Q8R550 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sh3kbp1Q8R550 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3kbp1Q8R550 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3kbp1Q8R550 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sh3kbp1Q8R550 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3kbp1Q8R550 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3kbp1Q8R550 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3kbp1Q8R550 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sh3kbp1Q8R550 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3kbp1Q8R550 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3kbp1Q8R550 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.53■□□□□ 0.56
Sh3kbp1Q8R550 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.53■□□□□ 0.56
Sh3kbp1Q8R550 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.53■□□□□ 0.56
Sh3kbp1Q8R550 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3kbp1Q8R550 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3kbp1Q8R550 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
Sh3kbp1Q8R550 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3kbp1Q8R550 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Gm2399-201ENSMUST00000104944 225 ntBASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3kbp1Q8R550 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Sh3kbp1Q8R550 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3kbp1Q8R550 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh3kbp1Q8R550 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3kbp1Q8R550 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3kbp1Q8R550 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3kbp1Q8R550 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3kbp1Q8R550 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.51■□□□□ 0.55
Sh3kbp1Q8R550 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3kbp1Q8R550 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.51■□□□□ 0.55
Sh3kbp1Q8R550 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sh3kbp1Q8R550 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3kbp1Q8R550 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms