Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Gm43173-201ENSMUST00000202246 593 ntBASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup35Q8R4R6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nup35Q8R4R6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.71□□□□□ -0.06
Nup35Q8R4R6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nup35Q8R4R6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.06
Nup35Q8R4R6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nup35Q8R4R6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup35Q8R4R6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Gm8493-201ENSMUST00000196881 489 ntBASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup35Q8R4R6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup35Q8R4R6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms