Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup85Q8R480 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup85Q8R480 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup85Q8R480 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Nup85Q8R480 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nup85Q8R480 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup85Q8R480 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup85Q8R480 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.47■□□□□ 0.55
Nup85Q8R480 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nup85Q8R480 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup85Q8R480 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup85Q8R480 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Nup85Q8R480 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup85Q8R480 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.47■□□□□ 0.55
Nup85Q8R480 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup85Q8R480 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup85Q8R480 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nup85Q8R480 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 Gm22240-201ENSMUST00000175225 82 ntBASIC18.46■□□□□ 0.55
Nup85Q8R480 Gm37856-201ENSMUST00000191634 999 ntBASIC18.46■□□□□ 0.55
Nup85Q8R480 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nup85Q8R480 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.46■□□□□ 0.55
Nup85Q8R480 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup85Q8R480 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nup85Q8R480 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nup85Q8R480 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup85Q8R480 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup85Q8R480 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup85Q8R480 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.45■□□□□ 0.54
Nup85Q8R480 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nup85Q8R480 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nup85Q8R480 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nup85Q8R480 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.45■□□□□ 0.54
Nup85Q8R480 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.45■□□□□ 0.54
Nup85Q8R480 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.45■□□□□ 0.54
Nup85Q8R480 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup85Q8R480 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Nup85Q8R480 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nup85Q8R480 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup85Q8R480 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nup85Q8R480 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup85Q8R480 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup85Q8R480 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup85Q8R480 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup85Q8R480 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.44■□□□□ 0.54
Nup85Q8R480 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Nup85Q8R480 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup85Q8R480 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup85Q8R480 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup85Q8R480 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup85Q8R480 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup85Q8R480 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup85Q8R480 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Nup85Q8R480 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup85Q8R480 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nup85Q8R480 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nup85Q8R480 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nup85Q8R480 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nup85Q8R480 Gm22325-201ENSMUST00000158904 308 ntBASIC18.43■□□□□ 0.54
Nup85Q8R480 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.43■□□□□ 0.54
Nup85Q8R480 Trmt13-210ENSMUST00000198454 880 ntBASIC18.43■□□□□ 0.54
Nup85Q8R480 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Nup85Q8R480 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nup85Q8R480 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nup85Q8R480 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nup85Q8R480 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nup85Q8R480 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nup85Q8R480 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.43■□□□□ 0.54
Nup85Q8R480 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nup85Q8R480 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nup85Q8R480 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Gm13168-201ENSMUST00000121771 632 ntBASIC18.42■□□□□ 0.54
Nup85Q8R480 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.42■□□□□ 0.54
Nup85Q8R480 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup85Q8R480 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms