Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nudcd3Q8R1N4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nudcd3Q8R1N4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nudcd3Q8R1N4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nudcd3Q8R1N4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nudcd3Q8R1N4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nudcd3Q8R1N4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.02■□□□□ 0.48
Nudcd3Q8R1N4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nudcd3Q8R1N4 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.02■□□□□ 0.48
Nudcd3Q8R1N4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nudcd3Q8R1N4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nudcd3Q8R1N4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nudcd3Q8R1N4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nudcd3Q8R1N4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nudcd3Q8R1N4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nudcd3Q8R1N4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nudcd3Q8R1N4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Gm21956-201ENSMUST00000179946 522 ntBASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nudcd3Q8R1N4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Gm8969-201ENSMUST00000199694 526 ntBASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Gm13241-201ENSMUST00000094493 780 ntBASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nudcd3Q8R1N4 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Gm40848-201ENSMUST00000221998 324 ntBASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Nudcd3Q8R1N4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nudcd3Q8R1N4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nudcd3Q8R1N4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Nudcd3Q8R1N4 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.97■□□□□ 0.47
Nudcd3Q8R1N4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nudcd3Q8R1N4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms