Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.28■□□□□ 0.68
Rpp40Q8R1F9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpp40Q8R1F9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.28■□□□□ 0.68
Rpp40Q8R1F9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpp40Q8R1F9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.28■□□□□ 0.68
Rpp40Q8R1F9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.28■□□□□ 0.68
Rpp40Q8R1F9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpp40Q8R1F9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpp40Q8R1F9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.27■□□□□ 0.68
Rpp40Q8R1F9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.27■□□□□ 0.68
Rpp40Q8R1F9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpp40Q8R1F9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpp40Q8R1F9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.27■□□□□ 0.68
Rpp40Q8R1F9 Mir6349-201ENSMUST00000184059 97 ntBASIC19.27■□□□□ 0.68
Rpp40Q8R1F9 Gm18025-201ENSMUST00000221733 862 ntBASIC19.27■□□□□ 0.68
Rpp40Q8R1F9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpp40Q8R1F9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rpp40Q8R1F9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpp40Q8R1F9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rpp40Q8R1F9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpp40Q8R1F9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpp40Q8R1F9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp40Q8R1F9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp40Q8R1F9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp40Q8R1F9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp40Q8R1F9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp40Q8R1F9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rpp40Q8R1F9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp40Q8R1F9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp40Q8R1F9 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.26■□□□□ 0.67
Rpp40Q8R1F9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp40Q8R1F9 Gm42545-201ENSMUST00000202755 922 ntBASIC19.26■□□□□ 0.67
Rpp40Q8R1F9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp40Q8R1F9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp40Q8R1F9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp40Q8R1F9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp40Q8R1F9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rpp40Q8R1F9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp40Q8R1F9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.25■□□□□ 0.67
Rpp40Q8R1F9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.25■□□□□ 0.67
Rpp40Q8R1F9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.25■□□□□ 0.67
Rpp40Q8R1F9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rpp40Q8R1F9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.25■□□□□ 0.67
Rpp40Q8R1F9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.25■□□□□ 0.67
Rpp40Q8R1F9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp40Q8R1F9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp40Q8R1F9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.24■□□□□ 0.67
Rpp40Q8R1F9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpp40Q8R1F9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp40Q8R1F9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rpp40Q8R1F9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rpp40Q8R1F9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp40Q8R1F9 Gm43183-201ENSMUST00000200632 547 ntBASIC19.22■□□□□ 0.67
Rpp40Q8R1F9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rpp40Q8R1F9 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.22■□□□□ 0.67
Rpp40Q8R1F9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp40Q8R1F9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.22■□□□□ 0.67
Rpp40Q8R1F9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp40Q8R1F9 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.22■□□□□ 0.67
Rpp40Q8R1F9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp40Q8R1F9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 Gm37292-201ENSMUST00000192062 758 ntBASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms