Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atf7Q8R0S1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atf7Q8R0S1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Gm5408-201ENSMUST00000197998 747 ntBASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf7Q8R0S1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atf7Q8R0S1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Zfp783-201ENSMUST00000095946 670 ntBASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atf7Q8R0S1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Atf7Q8R0S1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.23■□□□□ 0.99
Atf7Q8R0S1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.23■□□□□ 0.99
Atf7Q8R0S1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atf7Q8R0S1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Atf7Q8R0S1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atf7Q8R0S1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atf7Q8R0S1 Gm10602-201ENSMUST00000098239 609 ntBASIC21.23■□□□□ 0.99
Atf7Q8R0S1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atf7Q8R0S1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Atf7Q8R0S1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf7Q8R0S1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf7Q8R0S1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf7Q8R0S1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.22■□□□□ 0.99
Atf7Q8R0S1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Atf7Q8R0S1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf7Q8R0S1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf7Q8R0S1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.22■□□□□ 0.99
Atf7Q8R0S1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf7Q8R0S1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf7Q8R0S1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.22■□□□□ 0.99
Atf7Q8R0S1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf7Q8R0S1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Flg-201ENSMUST00000050758 1488 ntBASIC21.21■□□□□ 0.99
Atf7Q8R0S1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.21■□□□□ 0.99
Atf7Q8R0S1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Atf7Q8R0S1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Atf7Q8R0S1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.2■□□□□ 0.98
Atf7Q8R0S1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Atf7Q8R0S1 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.2■□□□□ 0.98
Atf7Q8R0S1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Atf7Q8R0S1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.2■□□□□ 0.98
Atf7Q8R0S1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.2■□□□□ 0.98
Atf7Q8R0S1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atf7Q8R0S1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.2■□□□□ 0.98
Atf7Q8R0S1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atf7Q8R0S1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atf7Q8R0S1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.2■□□□□ 0.98
Atf7Q8R0S1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atf7Q8R0S1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms