Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sf3a1Q8K4Z5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
Sf3a1Q8K4Z5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sf3a1Q8K4Z5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Sf3a1Q8K4Z5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Sf3a1Q8K4Z5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.98■■□□□ 1.11
Sf3a1Q8K4Z5 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.98■■□□□ 1.11
Sf3a1Q8K4Z5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sf3a1Q8K4Z5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sf3a1Q8K4Z5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sf3a1Q8K4Z5 Trmt13-210ENSMUST00000198454 880 ntBASIC21.98■■□□□ 1.11
Sf3a1Q8K4Z5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sf3a1Q8K4Z5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Sf3a1Q8K4Z5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
Sf3a1Q8K4Z5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sf3a1Q8K4Z5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sf3a1Q8K4Z5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sf3a1Q8K4Z5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sf3a1Q8K4Z5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Sf3a1Q8K4Z5 Gm27011-201ENSMUST00000182352 972 ntBASIC21.97■■□□□ 1.11
Sf3a1Q8K4Z5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.97■■□□□ 1.11
Sf3a1Q8K4Z5 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.97■■□□□ 1.11
Sf3a1Q8K4Z5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sf3a1Q8K4Z5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sf3a1Q8K4Z5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sf3a1Q8K4Z5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sf3a1Q8K4Z5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Sf3a1Q8K4Z5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Sf3a1Q8K4Z5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sf3a1Q8K4Z5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.96■■□□□ 1.11
Sf3a1Q8K4Z5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
Sf3a1Q8K4Z5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sf3a1Q8K4Z5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sf3a1Q8K4Z5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Sf3a1Q8K4Z5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sf3a1Q8K4Z5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.96■■□□□ 1.11
Sf3a1Q8K4Z5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sf3a1Q8K4Z5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.96■■□□□ 1.11
Sf3a1Q8K4Z5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sf3a1Q8K4Z5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sf3a1Q8K4Z5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Mtag2-201ENSMUST00000058665 714 ntBASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sf3a1Q8K4Z5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms