Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Spsb2-203ENSMUST00000112473 1322 ntBASIC23.64■■□□□ 1.38
Ddx54Q8K4L0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.64■■□□□ 1.37
Ddx54Q8K4L0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx54Q8K4L0 Gm7638-201ENSMUST00000121348 967 ntBASIC23.64■■□□□ 1.37
Ddx54Q8K4L0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx54Q8K4L0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC23.64■■□□□ 1.37
Ddx54Q8K4L0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx54Q8K4L0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx54Q8K4L0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx54Q8K4L0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx54Q8K4L0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx54Q8K4L0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx54Q8K4L0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC23.63■■□□□ 1.37
Ddx54Q8K4L0 Gm37805-201ENSMUST00000192612 1094 ntBASIC23.63■■□□□ 1.37
Ddx54Q8K4L0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx54Q8K4L0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC23.63■■□□□ 1.37
Ddx54Q8K4L0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx54Q8K4L0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx54Q8K4L0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx54Q8K4L0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx54Q8K4L0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Ddx54Q8K4L0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx54Q8K4L0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx54Q8K4L0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx54Q8K4L0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx54Q8K4L0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx54Q8K4L0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC23.62■■□□□ 1.37
Ddx54Q8K4L0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Ddx54Q8K4L0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ddx54Q8K4L0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx54Q8K4L0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx54Q8K4L0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx54Q8K4L0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
Ddx54Q8K4L0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx54Q8K4L0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
Ddx54Q8K4L0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx54Q8K4L0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx54Q8K4L0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Gm11950-201ENSMUST00000121615 838 ntBASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 AW822252-206ENSMUST00000208904 237 ntBASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx54Q8K4L0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx54Q8K4L0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx54Q8K4L0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx54Q8K4L0 Gm27357-201ENSMUST00000183754 135 ntBASIC23.59■■□□□ 1.37
Ddx54Q8K4L0 AC164629.2-201ENSMUST00000217916 270 ntBASIC23.59■■□□□ 1.37
Ddx54Q8K4L0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx54Q8K4L0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx54Q8K4L0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx54Q8K4L0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
Ddx54Q8K4L0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Ddx54Q8K4L0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Gm11355-201ENSMUST00000121120 306 ntBASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Gm7213-201ENSMUST00000215977 950 ntBASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Ddx54Q8K4L0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ddx54Q8K4L0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ddx54Q8K4L0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Ddx54Q8K4L0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ddx54Q8K4L0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx54Q8K4L0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx54Q8K4L0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx54Q8K4L0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Ddx54Q8K4L0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx54Q8K4L0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx54Q8K4L0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Ddx54Q8K4L0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Ddx54Q8K4L0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx54Q8K4L0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx54Q8K4L0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx54Q8K4L0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
Ddx54Q8K4L0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC23.56■■□□□ 1.36
Ddx54Q8K4L0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx54Q8K4L0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx54Q8K4L0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms