Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Gm22238-201ENSMUST00000175222 88 ntBASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf4Q8K4J2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ebf4Q8K4J2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Ebf4Q8K4J2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf4Q8K4J2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf4Q8K4J2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms