Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.3■■□□□ 1
Cchcr1Q8K2I2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
Cchcr1Q8K2I2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cchcr1Q8K2I2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cchcr1Q8K2I2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cchcr1Q8K2I2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cchcr1Q8K2I2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cchcr1Q8K2I2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cchcr1Q8K2I2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cchcr1Q8K2I2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cchcr1Q8K2I2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.29■■□□□ 1
Cchcr1Q8K2I2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cchcr1Q8K2I2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cchcr1Q8K2I2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cchcr1Q8K2I2 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.29■■□□□ 1
Cchcr1Q8K2I2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cchcr1Q8K2I2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cchcr1Q8K2I2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cchcr1Q8K2I2 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.28■■□□□ 1
Cchcr1Q8K2I2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.28■■□□□ 1
Cchcr1Q8K2I2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cchcr1Q8K2I2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cchcr1Q8K2I2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
Cchcr1Q8K2I2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.28■■□□□ 1
Cchcr1Q8K2I2 Gm8969-201ENSMUST00000199694 526 ntBASIC21.28■■□□□ 1
Cchcr1Q8K2I2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cchcr1Q8K2I2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cchcr1Q8K2I2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cchcr1Q8K2I2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cchcr1Q8K2I2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cchcr1Q8K2I2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cchcr1Q8K2I2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.27■■□□□ 1
Cchcr1Q8K2I2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cchcr1Q8K2I2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cchcr1Q8K2I2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cchcr1Q8K2I2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cchcr1Q8K2I2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cchcr1Q8K2I2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cchcr1Q8K2I2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cchcr1Q8K2I2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Cchcr1Q8K2I2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cchcr1Q8K2I2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cchcr1Q8K2I2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Cchcr1Q8K2I2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cchcr1Q8K2I2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cchcr1Q8K2I2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cchcr1Q8K2I2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cchcr1Q8K2I2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cchcr1Q8K2I2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.26■□□□□ 0.99
Cchcr1Q8K2I2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cchcr1Q8K2I2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cchcr1Q8K2I2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cchcr1Q8K2I2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cchcr1Q8K2I2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cchcr1Q8K2I2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cchcr1Q8K2I2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cchcr1Q8K2I2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cchcr1Q8K2I2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cchcr1Q8K2I2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cchcr1Q8K2I2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cchcr1Q8K2I2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cchcr1Q8K2I2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.25■□□□□ 0.99
Cchcr1Q8K2I2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cchcr1Q8K2I2 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.25■□□□□ 0.99
Cchcr1Q8K2I2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Gm18284-201ENSMUST00000172604 624 ntBASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cchcr1Q8K2I2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cchcr1Q8K2I2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cchcr1Q8K2I2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cchcr1Q8K2I2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cchcr1Q8K2I2 Gm10849-201ENSMUST00000100397 618 ntBASIC21.22■□□□□ 0.99
Cchcr1Q8K2I2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.22■□□□□ 0.99
Cchcr1Q8K2I2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms