Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtn1Q8K0T0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Gm12527-201ENSMUST00000117967 564 ntBASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Gm27275-201ENSMUST00000184318 272 ntBASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rtn1Q8K0T0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Rtn1Q8K0T0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rtn1Q8K0T0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Rtn1Q8K0T0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rtn1Q8K0T0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Rtn1Q8K0T0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rtn1Q8K0T0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rtn1Q8K0T0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rtn1Q8K0T0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rtn1Q8K0T0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rtn1Q8K0T0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.75■□□□□ 0.91
Rtn1Q8K0T0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rtn1Q8K0T0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rtn1Q8K0T0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rtn1Q8K0T0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rtn1Q8K0T0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rtn1Q8K0T0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Gm11249-201ENSMUST00000117071 859 ntBASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Mtag2-201ENSMUST00000058665 714 ntBASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rtn1Q8K0T0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rtn1Q8K0T0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.73■□□□□ 0.91
Rtn1Q8K0T0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rtn1Q8K0T0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rtn1Q8K0T0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rtn1Q8K0T0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rtn1Q8K0T0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rtn1Q8K0T0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rtn1Q8K0T0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rtn1Q8K0T0 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.73■□□□□ 0.91
Rtn1Q8K0T0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rtn1Q8K0T0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rtn1Q8K0T0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.73■□□□□ 0.91
Rtn1Q8K0T0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
Rtn1Q8K0T0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn1Q8K0T0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms