Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfwd3Q8CIK8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfwd3Q8CIK8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfwd3Q8CIK8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfwd3Q8CIK8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfwd3Q8CIK8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfwd3Q8CIK8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
Rfwd3Q8CIK8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Rfwd3Q8CIK8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.88■□□□□ 0.29
Rfwd3Q8CIK8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.88■□□□□ 0.29
Rfwd3Q8CIK8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfwd3Q8CIK8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfwd3Q8CIK8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfwd3Q8CIK8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfwd3Q8CIK8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfwd3Q8CIK8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.87■□□□□ 0.29
Rfwd3Q8CIK8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms