Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Syne4Q8CII8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Syne4Q8CII8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Syne4Q8CII8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Syne4Q8CII8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Syne4Q8CII8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Syne4Q8CII8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Syne4Q8CII8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Syne4Q8CII8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Syne4Q8CII8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Syne4Q8CII8 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.43■□□□□ 0.86
Syne4Q8CII8 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.43■□□□□ 0.86
Syne4Q8CII8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Syne4Q8CII8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.43■□□□□ 0.86
Syne4Q8CII8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Syne4Q8CII8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Syne4Q8CII8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Syne4Q8CII8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Syne4Q8CII8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Syne4Q8CII8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Syne4Q8CII8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Syne4Q8CII8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Syne4Q8CII8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Syne4Q8CII8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Syne4Q8CII8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syne4Q8CII8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syne4Q8CII8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syne4Q8CII8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Syne4Q8CII8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syne4Q8CII8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Syne4Q8CII8 Gm4974-201ENSMUST00000209974 875 ntBASIC20.42■□□□□ 0.86
Syne4Q8CII8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syne4Q8CII8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
Syne4Q8CII8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syne4Q8CII8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syne4Q8CII8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syne4Q8CII8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Syne4Q8CII8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Syne4Q8CII8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne4Q8CII8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Syne4Q8CII8 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.41■□□□□ 0.86
Syne4Q8CII8 Gm7284-201ENSMUST00000131667 944 ntBASIC20.41■□□□□ 0.86
Syne4Q8CII8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Syne4Q8CII8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne4Q8CII8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne4Q8CII8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne4Q8CII8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.41■□□□□ 0.86
Syne4Q8CII8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne4Q8CII8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne4Q8CII8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Syne4Q8CII8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne4Q8CII8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Syne4Q8CII8 Gm17661-201ENSMUST00000170317 270 ntBASIC20.4■□□□□ 0.86
Syne4Q8CII8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne4Q8CII8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Syne4Q8CII8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne4Q8CII8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne4Q8CII8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne4Q8CII8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Syne4Q8CII8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne4Q8CII8 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.39■□□□□ 0.86
Syne4Q8CII8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Syne4Q8CII8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Syne4Q8CII8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Syne4Q8CII8 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.39■□□□□ 0.86
Syne4Q8CII8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Syne4Q8CII8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.39■□□□□ 0.86
Syne4Q8CII8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.39■□□□□ 0.85
Syne4Q8CII8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.39■□□□□ 0.85
Syne4Q8CII8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Syne4Q8CII8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.39■□□□□ 0.85
Syne4Q8CII8 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.39■□□□□ 0.85
Syne4Q8CII8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syne4Q8CII8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syne4Q8CII8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.38■□□□□ 0.85
Syne4Q8CII8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Syne4Q8CII8 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.38■□□□□ 0.85
Syne4Q8CII8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Syne4Q8CII8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Syne4Q8CII8 Gm16061-201ENSMUST00000122167 857 ntBASIC20.38■□□□□ 0.85
Syne4Q8CII8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.38■□□□□ 0.85
Syne4Q8CII8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Syne4Q8CII8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Syne4Q8CII8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Syne4Q8CII8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Syne4Q8CII8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Syne4Q8CII8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Syne4Q8CII8 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.38■□□□□ 0.85
Syne4Q8CII8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syne4Q8CII8 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.37■□□□□ 0.85
Syne4Q8CII8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.37■□□□□ 0.85
Syne4Q8CII8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Syne4Q8CII8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Syne4Q8CII8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Syne4Q8CII8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.37■□□□□ 0.85
Syne4Q8CII8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Syne4Q8CII8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.37■□□□□ 0.85
Syne4Q8CII8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.37■□□□□ 0.85
Syne4Q8CII8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syne4Q8CII8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms