Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.34■□□□□ 0.85
Depdc1aQ8CIG0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Depdc1aQ8CIG0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Depdc1aQ8CIG0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Depdc1aQ8CIG0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Depdc1aQ8CIG0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Depdc1aQ8CIG0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Depdc1aQ8CIG0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Depdc1aQ8CIG0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Depdc1aQ8CIG0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Gm15565-201ENSMUST00000118890 427 ntBASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.32■□□□□ 0.84
Depdc1aQ8CIG0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Gm21814-202ENSMUST00000203277 873 ntBASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1aQ8CIG0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Depdc1aQ8CIG0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Depdc1aQ8CIG0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Depdc1aQ8CIG0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Depdc1aQ8CIG0 Gm11643-201ENSMUST00000119578 864 ntBASIC20.3■□□□□ 0.84
Depdc1aQ8CIG0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.3■□□□□ 0.84
Depdc1aQ8CIG0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Depdc1aQ8CIG0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Depdc1aQ8CIG0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Depdc1aQ8CIG0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.3■□□□□ 0.84
Depdc1aQ8CIG0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Depdc1aQ8CIG0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1aQ8CIG0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Gm5417-201ENSMUST00000079706 384 ntBASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1aQ8CIG0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1aQ8CIG0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1aQ8CIG0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1aQ8CIG0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1aQ8CIG0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1aQ8CIG0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Depdc1aQ8CIG0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1aQ8CIG0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1aQ8CIG0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms