Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip4Q8CI96 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip4Q8CI96 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip4Q8CI96 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clip4Q8CI96 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip4Q8CI96 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Clip4Q8CI96 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.1■□□□□ 0.49
Clip4Q8CI96 Fst-202ENSMUST00000223640 2612 ntBASIC18.1■□□□□ 0.49
Clip4Q8CI96 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.1■□□□□ 0.49
Clip4Q8CI96 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip4Q8CI96 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip4Q8CI96 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip4Q8CI96 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip4Q8CI96 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip4Q8CI96 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.09■□□□□ 0.49
Clip4Q8CI96 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.09■□□□□ 0.49
Clip4Q8CI96 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clip4Q8CI96 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clip4Q8CI96 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Clip4Q8CI96 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clip4Q8CI96 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Clip4Q8CI96 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clip4Q8CI96 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clip4Q8CI96 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clip4Q8CI96 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clip4Q8CI96 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.08■□□□□ 0.48
Clip4Q8CI96 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.08■□□□□ 0.48
Clip4Q8CI96 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clip4Q8CI96 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clip4Q8CI96 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.08■□□□□ 0.48
Clip4Q8CI96 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clip4Q8CI96 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clip4Q8CI96 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clip4Q8CI96 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clip4Q8CI96 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Clip4Q8CI96 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clip4Q8CI96 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Clip4Q8CI96 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clip4Q8CI96 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clip4Q8CI96 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clip4Q8CI96 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clip4Q8CI96 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Clip4Q8CI96 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clip4Q8CI96 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Clip4Q8CI96 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clip4Q8CI96 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clip4Q8CI96 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clip4Q8CI96 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clip4Q8CI96 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.06■□□□□ 0.48
Clip4Q8CI96 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clip4Q8CI96 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clip4Q8CI96 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.05■□□□□ 0.48
Clip4Q8CI96 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Clip4Q8CI96 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.05■□□□□ 0.48
Clip4Q8CI96 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clip4Q8CI96 Gm4968-201ENSMUST00000071458 858 ntBASIC18.05■□□□□ 0.48
Clip4Q8CI96 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clip4Q8CI96 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clip4Q8CI96 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clip4Q8CI96 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms