Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
ShfQ8CG80 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
ShfQ8CG80 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.07■□□□□ 0.16
ShfQ8CG80 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
ShfQ8CG80 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ShfQ8CG80 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ShfQ8CG80 Gm6420-201ENSMUST00000193885 723 ntBASIC16.07■□□□□ 0.16
ShfQ8CG80 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.07■□□□□ 0.16
ShfQ8CG80 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ShfQ8CG80 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ShfQ8CG80 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ShfQ8CG80 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ShfQ8CG80 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ShfQ8CG80 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ShfQ8CG80 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ShfQ8CG80 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ShfQ8CG80 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ShfQ8CG80 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ShfQ8CG80 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ShfQ8CG80 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ShfQ8CG80 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ShfQ8CG80 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ShfQ8CG80 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ShfQ8CG80 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ShfQ8CG80 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.06■□□□□ 0.16
ShfQ8CG80 Nespas-201ENSMUST00000143738 1083 ntBASIC16.06■□□□□ 0.16
ShfQ8CG80 Gm42778-201ENSMUST00000199644 553 ntBASIC16.06■□□□□ 0.16
ShfQ8CG80 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ShfQ8CG80 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.06■□□□□ 0.16
ShfQ8CG80 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ShfQ8CG80 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
ShfQ8CG80 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ShfQ8CG80 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ShfQ8CG80 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ShfQ8CG80 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ShfQ8CG80 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.05■□□□□ 0.16
ShfQ8CG80 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ShfQ8CG80 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ShfQ8CG80 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ShfQ8CG80 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ShfQ8CG80 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ShfQ8CG80 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ShfQ8CG80 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ShfQ8CG80 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ShfQ8CG80 Gm10493-201ENSMUST00000097270 612 ntBASIC16.05■□□□□ 0.16
ShfQ8CG80 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ShfQ8CG80 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ShfQ8CG80 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ShfQ8CG80 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ShfQ8CG80 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.05■□□□□ 0.16
ShfQ8CG80 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ShfQ8CG80 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.05■□□□□ 0.16
ShfQ8CG80 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.04■□□□□ 0.16
ShfQ8CG80 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ShfQ8CG80 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ShfQ8CG80 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.04■□□□□ 0.16
ShfQ8CG80 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ShfQ8CG80 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
ShfQ8CG80 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ShfQ8CG80 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ShfQ8CG80 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ShfQ8CG80 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ShfQ8CG80 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.04■□□□□ 0.16
ShfQ8CG80 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.04■□□□□ 0.16
ShfQ8CG80 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.04■□□□□ 0.16
ShfQ8CG80 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ShfQ8CG80 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ShfQ8CG80 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ShfQ8CG80 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ShfQ8CG80 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ShfQ8CG80 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ShfQ8CG80 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
ShfQ8CG80 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShfQ8CG80 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShfQ8CG80 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShfQ8CG80 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ShfQ8CG80 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShfQ8CG80 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
ShfQ8CG80 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.03■□□□□ 0.16
ShfQ8CG80 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
ShfQ8CG80 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShfQ8CG80 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ShfQ8CG80 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ShfQ8CG80 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShfQ8CG80 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ShfQ8CG80 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShfQ8CG80 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ShfQ8CG80 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShfQ8CG80 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ShfQ8CG80 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShfQ8CG80 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ShfQ8CG80 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShfQ8CG80 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShfQ8CG80 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShfQ8CG80 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShfQ8CG80 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShfQ8CG80 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ShfQ8CG80 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.02■□□□□ 0.15
ShfQ8CG80 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ShfQ8CG80 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms