Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smc4Q8CG47 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC22.2■■□□□ 1.14
Smc4Q8CG47 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smc4Q8CG47 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smc4Q8CG47 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc4Q8CG47 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc4Q8CG47 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc4Q8CG47 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC22.19■■□□□ 1.14
Smc4Q8CG47 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Smc4Q8CG47 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc4Q8CG47 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc4Q8CG47 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Smc4Q8CG47 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
Smc4Q8CG47 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc4Q8CG47 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc4Q8CG47 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc4Q8CG47 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc4Q8CG47 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Smc4Q8CG47 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Smc4Q8CG47 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Smc4Q8CG47 Gm37292-201ENSMUST00000192062 758 ntBASIC22.18■■□□□ 1.14
Smc4Q8CG47 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Smc4Q8CG47 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc4Q8CG47 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc4Q8CG47 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Smc4Q8CG47 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smc4Q8CG47 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Smc4Q8CG47 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smc4Q8CG47 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC22.17■■□□□ 1.14
Smc4Q8CG47 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smc4Q8CG47 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC22.17■■□□□ 1.14
Smc4Q8CG47 Gm12382-201ENSMUST00000122005 922 ntBASIC22.17■■□□□ 1.14
Smc4Q8CG47 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smc4Q8CG47 AL672049.1-201ENSMUST00000197943 91 ntBASIC22.17■■□□□ 1.14
Smc4Q8CG47 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smc4Q8CG47 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC22.17■■□□□ 1.14
Smc4Q8CG47 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Smc4Q8CG47 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Smc4Q8CG47 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smc4Q8CG47 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Smc4Q8CG47 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smc4Q8CG47 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smc4Q8CG47 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc4Q8CG47 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc4Q8CG47 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc4Q8CG47 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Smc4Q8CG47 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc4Q8CG47 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Smc4Q8CG47 AC166341.7-201ENSMUST00000221698 126 ntBASIC22.16■■□□□ 1.14
Smc4Q8CG47 AC175538.1-201ENSMUST00000225343 1269 ntBASIC22.16■■□□□ 1.14
Smc4Q8CG47 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC22.16■■□□□ 1.14
Smc4Q8CG47 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc4Q8CG47 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Smc4Q8CG47 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smc4Q8CG47 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Smc4Q8CG47 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Smc4Q8CG47 Mir2861-201ENSMUST00000175539 82 ntBASIC22.15■■□□□ 1.14
Smc4Q8CG47 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC22.15■■□□□ 1.14
Smc4Q8CG47 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.15■■□□□ 1.14
Smc4Q8CG47 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smc4Q8CG47 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smc4Q8CG47 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Smc4Q8CG47 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Smc4Q8CG47 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Smc4Q8CG47 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Smc4Q8CG47 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Smc4Q8CG47 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.14■■□□□ 1.13
Smc4Q8CG47 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Smc4Q8CG47 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Smc4Q8CG47 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC22.14■■□□□ 1.13
Smc4Q8CG47 Gm6627-201ENSMUST00000218299 2386 ntBASIC22.13■■□□□ 1.13
Smc4Q8CG47 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Smc4Q8CG47 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Smc4Q8CG47 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Smc4Q8CG47 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Smc4Q8CG47 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Smc4Q8CG47 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC22.13■■□□□ 1.13
Smc4Q8CG47 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Smc4Q8CG47 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Smc4Q8CG47 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Smc4Q8CG47 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC22.13■■□□□ 1.13
Smc4Q8CG47 Gm10654-201ENSMUST00000098653 1633 ntBASIC22.13■■□□□ 1.13
Smc4Q8CG47 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Gm37055-201ENSMUST00000191866 133 ntBASIC22.12■■□□□ 1.13
Smc4Q8CG47 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Smc4Q8CG47 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms