Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam228aQ8CDW1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam228aQ8CDW1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam228aQ8CDW1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam228aQ8CDW1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam228aQ8CDW1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Fam228aQ8CDW1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam228aQ8CDW1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam228aQ8CDW1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Fam228aQ8CDW1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam228aQ8CDW1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam228aQ8CDW1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Fam228aQ8CDW1 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.93■□□□□ 0.62
Fam228aQ8CDW1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.93■□□□□ 0.62
Fam228aQ8CDW1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Fam228aQ8CDW1 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.93■□□□□ 0.62
Fam228aQ8CDW1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam228aQ8CDW1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam228aQ8CDW1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Gm27454-201ENSMUST00000185090 204 ntBASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Fam228aQ8CDW1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam228aQ8CDW1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fam228aQ8CDW1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Fam228aQ8CDW1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
Fam228aQ8CDW1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Fam228aQ8CDW1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Fam228aQ8CDW1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.89■□□□□ 0.62
Fam228aQ8CDW1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Fam228aQ8CDW1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Fam228aQ8CDW1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Fam228aQ8CDW1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Fam228aQ8CDW1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Fam228aQ8CDW1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Fam228aQ8CDW1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Fam228aQ8CDW1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Gm43017-201ENSMUST00000198296 752 ntBASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fam228aQ8CDW1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Fam228aQ8CDW1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms