Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trim52Q8CDV4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim52Q8CDV4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trim52Q8CDV4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trim52Q8CDV4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim52Q8CDV4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim52Q8CDV4 Gm38027-201ENSMUST00000192315 235 ntBASIC22.34■■□□□ 1.17
Trim52Q8CDV4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC22.34■■□□□ 1.17
Trim52Q8CDV4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim52Q8CDV4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC22.33■■□□□ 1.17
Trim52Q8CDV4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim52Q8CDV4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Trim52Q8CDV4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim52Q8CDV4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Trim52Q8CDV4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim52Q8CDV4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC22.33■■□□□ 1.17
Trim52Q8CDV4 Gm4974-201ENSMUST00000209974 875 ntBASIC22.33■■□□□ 1.17
Trim52Q8CDV4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim52Q8CDV4 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.33■■□□□ 1.16
Trim52Q8CDV4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trim52Q8CDV4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trim52Q8CDV4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim52Q8CDV4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim52Q8CDV4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim52Q8CDV4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trim52Q8CDV4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trim52Q8CDV4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC22.32■■□□□ 1.16
Trim52Q8CDV4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Trim52Q8CDV4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim52Q8CDV4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim52Q8CDV4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Trim52Q8CDV4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC22.32■■□□□ 1.16
Trim52Q8CDV4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Gm37820-201ENSMUST00000194021 2147 ntBASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Gm13401-201ENSMUST00000117074 291 ntBASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim52Q8CDV4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim52Q8CDV4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim52Q8CDV4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim52Q8CDV4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim52Q8CDV4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim52Q8CDV4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Trim52Q8CDV4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trim52Q8CDV4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trim52Q8CDV4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC22.3■■□□□ 1.16
Trim52Q8CDV4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
Trim52Q8CDV4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Trim52Q8CDV4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Trim52Q8CDV4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim52Q8CDV4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim52Q8CDV4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim52Q8CDV4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC22.29■■□□□ 1.16
Trim52Q8CDV4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC22.29■■□□□ 1.16
Trim52Q8CDV4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Trim52Q8CDV4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim52Q8CDV4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim52Q8CDV4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim52Q8CDV4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Trim52Q8CDV4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim52Q8CDV4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Trim52Q8CDV4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim52Q8CDV4 Gm10418-201ENSMUST00000100943 576 ntBASIC22.28■■□□□ 1.16
Trim52Q8CDV4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trim52Q8CDV4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Trim52Q8CDV4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC22.28■■□□□ 1.16
Trim52Q8CDV4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim52Q8CDV4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim52Q8CDV4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim52Q8CDV4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC22.27■■□□□ 1.16
Trim52Q8CDV4 Gm9694-201ENSMUST00000193347 1189 ntBASIC22.27■■□□□ 1.16
Trim52Q8CDV4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC22.27■■□□□ 1.16
Trim52Q8CDV4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Trim52Q8CDV4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim52Q8CDV4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim52Q8CDV4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim52Q8CDV4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Trim52Q8CDV4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.26■■□□□ 1.15
Trim52Q8CDV4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC22.26■■□□□ 1.15
Trim52Q8CDV4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim52Q8CDV4 Gm27463-201ENSMUST00000183569 57 ntBASIC22.26■■□□□ 1.15
Trim52Q8CDV4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC22.26■■□□□ 1.15
Trim52Q8CDV4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC22.26■■□□□ 1.15
Trim52Q8CDV4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC22.26■■□□□ 1.15
Trim52Q8CDV4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim52Q8CDV4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trim52Q8CDV4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim52Q8CDV4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms