Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc38Q8CDN8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc38Q8CDN8 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.98■□□□□ 0.79
Ccdc38Q8CDN8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc38Q8CDN8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc38Q8CDN8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 Gm6365-201ENSMUST00000054711 744 ntBASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc38Q8CDN8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.96■□□□□ 0.79
Ccdc38Q8CDN8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc38Q8CDN8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc38Q8CDN8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc38Q8CDN8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc38Q8CDN8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc38Q8CDN8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc38Q8CDN8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc38Q8CDN8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc38Q8CDN8 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.95■□□□□ 0.78
Ccdc38Q8CDN8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc38Q8CDN8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc38Q8CDN8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc38Q8CDN8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc38Q8CDN8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc38Q8CDN8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
Ccdc38Q8CDN8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc38Q8CDN8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc38Q8CDN8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc38Q8CDN8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc38Q8CDN8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc38Q8CDN8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc38Q8CDN8 Gm8495-201ENSMUST00000188740 694 ntBASIC19.93■□□□□ 0.78
Ccdc38Q8CDN8 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.93■□□□□ 0.78
Ccdc38Q8CDN8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc38Q8CDN8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc38Q8CDN8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc38Q8CDN8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc38Q8CDN8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc38Q8CDN8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Gm7290-201ENSMUST00000104990 617 ntBASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Gm12918-201ENSMUST00000120234 636 ntBASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Gm15710-201ENSMUST00000121821 636 ntBASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Gm5075-201ENSMUST00000196916 622 ntBASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ccdc38Q8CDN8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Gm7291-201ENSMUST00000199147 382 ntBASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Gm42569-201ENSMUST00000200539 472 ntBASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc38Q8CDN8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms