Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtp1Q8C8C1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rtp1Q8C8C1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rtp1Q8C8C1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Rtp1Q8C8C1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rtp1Q8C8C1 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp1Q8C8C1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtp1Q8C8C1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rtp1Q8C8C1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rtp1Q8C8C1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rtp1Q8C8C1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rtp1Q8C8C1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtp1Q8C8C1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtp1Q8C8C1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.59■□□□□ 0.89
Rtp1Q8C8C1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.59■□□□□ 0.89
Rtp1Q8C8C1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtp1Q8C8C1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rtp1Q8C8C1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rtp1Q8C8C1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtp1Q8C8C1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rtp1Q8C8C1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtp1Q8C8C1 Gm38027-201ENSMUST00000192315 235 ntBASIC20.58■□□□□ 0.89
Rtp1Q8C8C1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtp1Q8C8C1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtp1Q8C8C1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtp1Q8C8C1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rtp1Q8C8C1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtp1Q8C8C1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rtp1Q8C8C1 Gm7153-201ENSMUST00000117092 455 ntBASIC20.57■□□□□ 0.88
Rtp1Q8C8C1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rtp1Q8C8C1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.57■□□□□ 0.88
Rtp1Q8C8C1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtp1Q8C8C1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtp1Q8C8C1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtp1Q8C8C1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtp1Q8C8C1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 BC021767-201ENSMUST00000126387 1716 ntBASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Gm17807-201ENSMUST00000186869 298 ntBASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp1Q8C8C1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp1Q8C8C1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rtp1Q8C8C1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtp1Q8C8C1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtp1Q8C8C1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtp1Q8C8C1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtp1Q8C8C1 Gm25925-201ENSMUST00000158314 306 ntBASIC20.54■□□□□ 0.88
Rtp1Q8C8C1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms