Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Uba3Q8C878 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.95■□□□□ 0.62
Uba3Q8C878 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Gm38285-201ENSMUST00000192928 922 ntBASIC18.95■□□□□ 0.62
Uba3Q8C878 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Uba3Q8C878 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.95■□□□□ 0.62
Uba3Q8C878 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Uba3Q8C878 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uba3Q8C878 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uba3Q8C878 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Uba3Q8C878 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uba3Q8C878 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uba3Q8C878 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uba3Q8C878 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uba3Q8C878 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
Uba3Q8C878 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uba3Q8C878 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Uba3Q8C878 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.94■□□□□ 0.62
Uba3Q8C878 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Uba3Q8C878 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uba3Q8C878 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uba3Q8C878 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uba3Q8C878 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uba3Q8C878 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Uba3Q8C878 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Uba3Q8C878 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Uba3Q8C878 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Uba3Q8C878 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Uba3Q8C878 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Uba3Q8C878 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Uba3Q8C878 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Uba3Q8C878 Gm27011-201ENSMUST00000182352 972 ntBASIC18.93■□□□□ 0.62
Uba3Q8C878 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.93■□□□□ 0.62
Uba3Q8C878 Trmt13-210ENSMUST00000198454 880 ntBASIC18.93■□□□□ 0.62
Uba3Q8C878 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Uba3Q8C878 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Uba3Q8C878 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Uba3Q8C878 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Uba3Q8C878 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.93■□□□□ 0.62
Uba3Q8C878 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.93■□□□□ 0.62
Uba3Q8C878 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Uba3Q8C878 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.92■□□□□ 0.62
Uba3Q8C878 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.92■□□□□ 0.62
Uba3Q8C878 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Uba3Q8C878 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
Uba3Q8C878 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Uba3Q8C878 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Uba3Q8C878 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Uba3Q8C878 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uba3Q8C878 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Uba3Q8C878 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uba3Q8C878 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uba3Q8C878 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uba3Q8C878 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uba3Q8C878 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.91■□□□□ 0.62
Uba3Q8C878 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.91■□□□□ 0.62
Uba3Q8C878 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uba3Q8C878 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uba3Q8C878 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Uba3Q8C878 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.91■□□□□ 0.62
Uba3Q8C878 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.91■□□□□ 0.62
Uba3Q8C878 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uba3Q8C878 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uba3Q8C878 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uba3Q8C878 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uba3Q8C878 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.9■□□□□ 0.62
Uba3Q8C878 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uba3Q8C878 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms