Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.86■□□□□ 0.77
Trim9Q8C7M3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Flg-201ENSMUST00000050758 1488 ntBASIC19.85■□□□□ 0.77
Trim9Q8C7M3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trim9Q8C7M3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim9Q8C7M3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim9Q8C7M3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim9Q8C7M3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim9Q8C7M3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim9Q8C7M3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trim9Q8C7M3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim9Q8C7M3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.83■□□□□ 0.76
Trim9Q8C7M3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim9Q8C7M3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim9Q8C7M3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.83■□□□□ 0.76
Trim9Q8C7M3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim9Q8C7M3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Gm4968-201ENSMUST00000071458 858 ntBASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim9Q8C7M3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim9Q8C7M3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms