Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Gm2274-201ENSMUST00000184539 609 ntBASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a6Q8C6K9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a6Q8C6K9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Gm12085-201ENSMUST00000119263 940 ntBASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Gm14859-201ENSMUST00000117752 357 ntBASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a6Q8C6K9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Col6a6Q8C6K9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col6a6Q8C6K9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 Gm28033-201ENSMUST00000184224 96 ntBASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 Gm7461-201ENSMUST00000058918 827 ntBASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.2■□□□□ 0.18
Col6a6Q8C6K9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms