Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Eri3Q8C460 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.12■□□□□ 0.33
Eri3Q8C460 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.12■□□□□ 0.33
Eri3Q8C460 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Eri3Q8C460 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Eri3Q8C460 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Eri3Q8C460 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.12■□□□□ 0.33
Eri3Q8C460 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Eri3Q8C460 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Eri3Q8C460 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Eri3Q8C460 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.12■□□□□ 0.33
Eri3Q8C460 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 Gm12441-201ENSMUST00000121806 588 ntBASIC17.11■□□□□ 0.33
Eri3Q8C460 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Eri3Q8C460 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Eri3Q8C460 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Eri3Q8C460 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Eri3Q8C460 Tgds-204ENSMUST00000228543 1594 ntBASIC17.11■□□□□ 0.33
Eri3Q8C460 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Eri3Q8C460 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Eri3Q8C460 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.1■□□□□ 0.33
Eri3Q8C460 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.1■□□□□ 0.33
Eri3Q8C460 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.1■□□□□ 0.33
Eri3Q8C460 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.1■□□□□ 0.33
Eri3Q8C460 Gm2559-201ENSMUST00000201323 363 ntBASIC17.1■□□□□ 0.33
Eri3Q8C460 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.1■□□□□ 0.33
Eri3Q8C460 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Eri3Q8C460 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Eri3Q8C460 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Eri3Q8C460 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Eri3Q8C460 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Eri3Q8C460 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Eri3Q8C460 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.09■□□□□ 0.33
Eri3Q8C460 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.09■□□□□ 0.33
Eri3Q8C460 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.09■□□□□ 0.33
Eri3Q8C460 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.09■□□□□ 0.33
Eri3Q8C460 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 Flg-201ENSMUST00000050758 1488 ntBASIC17.09■□□□□ 0.33
Eri3Q8C460 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Eri3Q8C460 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.09■□□□□ 0.33
Eri3Q8C460 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eri3Q8C460 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.09■□□□□ 0.33
Eri3Q8C460 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Eri3Q8C460 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Eri3Q8C460 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Eri3Q8C460 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Eri3Q8C460 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Eri3Q8C460 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.08■□□□□ 0.33
Eri3Q8C460 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eri3Q8C460 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eri3Q8C460 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eri3Q8C460 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.08■□□□□ 0.32
Eri3Q8C460 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.08■□□□□ 0.32
Eri3Q8C460 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Eri3Q8C460 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eri3Q8C460 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eri3Q8C460 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Eri3Q8C460 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eri3Q8C460 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eri3Q8C460 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Eri3Q8C460 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eri3Q8C460 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eri3Q8C460 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Eri3Q8C460 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eri3Q8C460 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Eri3Q8C460 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eri3Q8C460 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Eri3Q8C460 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eri3Q8C460 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eri3Q8C460 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Eri3Q8C460 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eri3Q8C460 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Eri3Q8C460 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eri3Q8C460 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms