Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.08■□□□□ 0
Tsen54Q8C2A2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.08■□□□□ 0
Tsen54Q8C2A2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Tsen54Q8C2A2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Gm43017-201ENSMUST00000198296 752 ntBASIC15.07■□□□□ 0
Tsen54Q8C2A2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Serp2-204ENSMUST00000228055 705 ntBASIC15.07■□□□□ 0
Tsen54Q8C2A2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tsen54Q8C2A2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Tsen54Q8C2A2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tsen54Q8C2A2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Tsen54Q8C2A2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Tsen54Q8C2A2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tsen54Q8C2A2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.05■□□□□ 0
Tsen54Q8C2A2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tsen54Q8C2A2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.05■□□□□ 0
Tsen54Q8C2A2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.05■□□□□ 0
Tsen54Q8C2A2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tsen54Q8C2A2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tsen54Q8C2A2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tsen54Q8C2A2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tsen54Q8C2A2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.05■□□□□ -0
Tsen54Q8C2A2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Tsen54Q8C2A2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Tsen54Q8C2A2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Tsen54Q8C2A2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tsen54Q8C2A2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tsen54Q8C2A2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Tsen54Q8C2A2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tsen54Q8C2A2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tsen54Q8C2A2 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.05■□□□□ -0
Tsen54Q8C2A2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tsen54Q8C2A2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Tsen54Q8C2A2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tsen54Q8C2A2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Tsen54Q8C2A2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tsen54Q8C2A2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Tsen54Q8C2A2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Tsen54Q8C2A2 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.04■□□□□ -0
Tsen54Q8C2A2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tsen54Q8C2A2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms