Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ska3Q8C263 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ska3Q8C263 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ska3Q8C263 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ska3Q8C263 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ska3Q8C263 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ska3Q8C263 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.92■□□□□ 0.3
Ska3Q8C263 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ska3Q8C263 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.92■□□□□ 0.3
Ska3Q8C263 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ska3Q8C263 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ska3Q8C263 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.92■□□□□ 0.3
Ska3Q8C263 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ska3Q8C263 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ska3Q8C263 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.92■□□□□ 0.3
Ska3Q8C263 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Ska3Q8C263 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ska3Q8C263 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ska3Q8C263 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ska3Q8C263 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ska3Q8C263 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ska3Q8C263 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ska3Q8C263 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.91■□□□□ 0.3
Ska3Q8C263 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ska3Q8C263 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ska3Q8C263 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.91■□□□□ 0.3
Ska3Q8C263 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska3Q8C263 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ska3Q8C263 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska3Q8C263 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska3Q8C263 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Ska3Q8C263 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska3Q8C263 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska3Q8C263 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.9■□□□□ 0.3
Ska3Q8C263 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ska3Q8C263 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska3Q8C263 Flg-201ENSMUST00000050758 1488 ntBASIC16.9■□□□□ 0.3
Ska3Q8C263 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska3Q8C263 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska3Q8C263 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska3Q8C263 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ska3Q8C263 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ska3Q8C263 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.9■□□□□ 0.3
Ska3Q8C263 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ska3Q8C263 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ska3Q8C263 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ska3Q8C263 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Ska3Q8C263 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska3Q8C263 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska3Q8C263 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska3Q8C263 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.89■□□□□ 0.29
Ska3Q8C263 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska3Q8C263 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska3Q8C263 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska3Q8C263 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ska3Q8C263 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.89■□□□□ 0.29
Ska3Q8C263 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska3Q8C263 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Ska3Q8C263 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska3Q8C263 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ska3Q8C263 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska3Q8C263 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska3Q8C263 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska3Q8C263 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska3Q8C263 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
Ska3Q8C263 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska3Q8C263 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.88■□□□□ 0.29
Ska3Q8C263 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.88■□□□□ 0.29
Ska3Q8C263 Gm20049-201ENSMUST00000219950 730 ntBASIC16.88■□□□□ 0.29
Ska3Q8C263 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska3Q8C263 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska3Q8C263 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska3Q8C263 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska3Q8C263 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska3Q8C263 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ska3Q8C263 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ska3Q8C263 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska3Q8C263 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska3Q8C263 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska3Q8C263 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Ska3Q8C263 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ska3Q8C263 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ska3Q8C263 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms