Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim4Q8C1Q6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim4Q8C1Q6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Smim4Q8C1Q6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim4Q8C1Q6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Smim4Q8C1Q6 Gm10493-201ENSMUST00000097270 612 ntBASIC15.08■□□□□ 0
Smim4Q8C1Q6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.08■□□□□ 0
Smim4Q8C1Q6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Smim4Q8C1Q6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smim4Q8C1Q6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim4Q8C1Q6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim4Q8C1Q6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.08■□□□□ 0
Smim4Q8C1Q6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.07■□□□□ 0
Smim4Q8C1Q6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.07■□□□□ 0
Smim4Q8C1Q6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.07■□□□□ 0
Smim4Q8C1Q6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Smim4Q8C1Q6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.06■□□□□ 0
Smim4Q8C1Q6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.06■□□□□ 0
Smim4Q8C1Q6 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.06■□□□□ 0
Smim4Q8C1Q6 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.06■□□□□ 0
Smim4Q8C1Q6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smim4Q8C1Q6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms