Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp43Q8BUM9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp43Q8BUM9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp43Q8BUM9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.24■□□□□ 0.51
Usp43Q8BUM9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp43Q8BUM9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.24■□□□□ 0.51
Usp43Q8BUM9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp43Q8BUM9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp43Q8BUM9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Usp43Q8BUM9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp43Q8BUM9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp43Q8BUM9 Flg-201ENSMUST00000050758 1488 ntBASIC18.24■□□□□ 0.51
Usp43Q8BUM9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp43Q8BUM9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Gm4968-201ENSMUST00000071458 858 ntBASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp43Q8BUM9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp43Q8BUM9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Usp43Q8BUM9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp43Q8BUM9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp43Q8BUM9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.22■□□□□ 0.51
Usp43Q8BUM9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.22■□□□□ 0.51
Usp43Q8BUM9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp43Q8BUM9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp43Q8BUM9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp43Q8BUM9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.22■□□□□ 0.51
Usp43Q8BUM9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
Usp43Q8BUM9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp43Q8BUM9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Usp43Q8BUM9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp43Q8BUM9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.21■□□□□ 0.51
Usp43Q8BUM9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp43Q8BUM9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp43Q8BUM9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp43Q8BUM9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
Usp43Q8BUM9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Usp43Q8BUM9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp43Q8BUM9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp43Q8BUM9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp43Q8BUM9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.2■□□□□ 0.5
Usp43Q8BUM9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp43Q8BUM9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Usp43Q8BUM9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp43Q8BUM9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp43Q8BUM9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp43Q8BUM9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Usp43Q8BUM9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.19■□□□□ 0.5
Usp43Q8BUM9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp43Q8BUM9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Usp43Q8BUM9 Gm11927-201ENSMUST00000118472 759 ntBASIC18.19■□□□□ 0.5
Usp43Q8BUM9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp43Q8BUM9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp43Q8BUM9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Usp43Q8BUM9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp43Q8BUM9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp43Q8BUM9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Gm2559-201ENSMUST00000201323 363 ntBASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp43Q8BUM9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms