Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap1Q8BTW8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm43183-201ENSMUST00000200632 547 ntBASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Cdk5rap1Q8BTW8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm42545-201ENSMUST00000202755 922 ntBASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap1Q8BTW8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap1Q8BTW8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm12382-201ENSMUST00000122005 922 ntBASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms