Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne3Q8BT60 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cpne3Q8BT60 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne3Q8BT60 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.39■□□□□ 0.37
Cpne3Q8BT60 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Cpne3Q8BT60 Gm6420-201ENSMUST00000193885 723 ntBASIC17.39■□□□□ 0.37
Cpne3Q8BT60 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.39■□□□□ 0.37
Cpne3Q8BT60 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne3Q8BT60 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne3Q8BT60 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne3Q8BT60 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne3Q8BT60 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne3Q8BT60 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne3Q8BT60 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne3Q8BT60 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne3Q8BT60 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Gm18671-201ENSMUST00000214826 683 ntBASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne3Q8BT60 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.37■□□□□ 0.37
Cpne3Q8BT60 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne3Q8BT60 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne3Q8BT60 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Cpne3Q8BT60 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cpne3Q8BT60 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne3Q8BT60 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.36■□□□□ 0.37
Cpne3Q8BT60 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cpne3Q8BT60 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cpne3Q8BT60 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne3Q8BT60 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne3Q8BT60 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cpne3Q8BT60 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne3Q8BT60 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Gm7514-201ENSMUST00000209475 934 ntBASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne3Q8BT60 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne3Q8BT60 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne3Q8BT60 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne3Q8BT60 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Cpne3Q8BT60 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne3Q8BT60 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Cpne3Q8BT60 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne3Q8BT60 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms