Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Gm7290-201ENSMUST00000104990 617 ntBASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Gm12918-201ENSMUST00000120234 636 ntBASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Gm15710-201ENSMUST00000121821 636 ntBASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Gm5075-201ENSMUST00000196916 622 ntBASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf4Q8BQZ5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Gm6211-202ENSMUST00000167849 925 ntBASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4Q8BQZ5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.45■□□□□ 0.38
Cpsf4Q8BQZ5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4Q8BQZ5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cpsf4Q8BQZ5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms