Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Gm37935-201ENSMUST00000192012 982 ntBASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Grk6-206ENSMUST00000224995 2971 ntBASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.3■□□□□ 0.04
Smg1Q8BKX6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Mir3081-201ENSMUST00000175305 84 ntBASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Gm21559-201ENSMUST00000220638 855 ntBASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.29■□□□□ 0.04
Smg1Q8BKX6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Mir5130-201ENSMUST00000175160 84 ntBASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smg1Q8BKX6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smg1Q8BKX6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Smg1Q8BKX6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smg1Q8BKX6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smg1Q8BKX6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smg1Q8BKX6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.27■□□□□ 0.03
Smg1Q8BKX6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smg1Q8BKX6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Smg1Q8BKX6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smg1Q8BKX6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smg1Q8BKX6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smg1Q8BKX6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smg1Q8BKX6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smg1Q8BKX6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smg1Q8BKX6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smg1Q8BKX6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.26■□□□□ 0.03
Smg1Q8BKX6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.26■□□□□ 0.03
Smg1Q8BKX6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smg1Q8BKX6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smg1Q8BKX6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.26■□□□□ 0.03
Smg1Q8BKX6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smg1Q8BKX6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smg1Q8BKX6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smg1Q8BKX6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smg1Q8BKX6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Smg1Q8BKX6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smg1Q8BKX6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Smg1Q8BKX6 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.25■□□□□ 0.03
Smg1Q8BKX6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.25■□□□□ 0.03
Smg1Q8BKX6 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.25■□□□□ 0.03
Smg1Q8BKX6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smg1Q8BKX6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smg1Q8BKX6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms