Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Gm6433-201ENSMUST00000118634 875 ntBASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Usp1Q8BJQ2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Usp1Q8BJQ2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp1Q8BJQ2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp1Q8BJQ2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Usp1Q8BJQ2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Usp1Q8BJQ2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp1Q8BJQ2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.08■□□□□ 0.65
Usp1Q8BJQ2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Usp1Q8BJQ2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.08■□□□□ 0.64
Usp1Q8BJQ2 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.08■□□□□ 0.64
Usp1Q8BJQ2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.08■□□□□ 0.64
Usp1Q8BJQ2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.08■□□□□ 0.64
Usp1Q8BJQ2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp1Q8BJQ2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp1Q8BJQ2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Usp1Q8BJQ2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp1Q8BJQ2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Usp1Q8BJQ2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp1Q8BJQ2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp1Q8BJQ2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp1Q8BJQ2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp1Q8BJQ2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Usp1Q8BJQ2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp1Q8BJQ2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp1Q8BJQ2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp1Q8BJQ2 Gm42545-201ENSMUST00000202755 922 ntBASIC19.07■□□□□ 0.64
Usp1Q8BJQ2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.07■□□□□ 0.64
Usp1Q8BJQ2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp1Q8BJQ2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp1Q8BJQ2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp1Q8BJQ2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Gm43799-201ENSMUST00000201845 579 ntBASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.06■□□□□ 0.64
Usp1Q8BJQ2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Odf3b-204ENSMUST00000227834 930 ntBASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp1Q8BJQ2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.04■□□□□ 0.64
Usp1Q8BJQ2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp1Q8BJQ2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Usp1Q8BJQ2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp1Q8BJQ2 Gm12382-201ENSMUST00000122005 922 ntBASIC19.04■□□□□ 0.64
Usp1Q8BJQ2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Usp1Q8BJQ2 Gm37292-201ENSMUST00000192062 758 ntBASIC19.04■□□□□ 0.64
Usp1Q8BJQ2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp1Q8BJQ2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.04■□□□□ 0.64
Usp1Q8BJQ2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms