Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf38Q8BI21 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf38Q8BI21 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf38Q8BI21 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf38Q8BI21 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf38Q8BI21 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf38Q8BI21 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Gm42778-201ENSMUST00000199644 553 ntBASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf38Q8BI21 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf38Q8BI21 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf38Q8BI21 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf38Q8BI21 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf38Q8BI21 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.33■□□□□ 0.37
Rnf38Q8BI21 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf38Q8BI21 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf38Q8BI21 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf38Q8BI21 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf38Q8BI21 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf38Q8BI21 Gm8495-201ENSMUST00000188740 694 ntBASIC17.33■□□□□ 0.36
Rnf38Q8BI21 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.33■□□□□ 0.36
Rnf38Q8BI21 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf38Q8BI21 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf38Q8BI21 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.33■□□□□ 0.36
Rnf38Q8BI21 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rnf38Q8BI21 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf38Q8BI21 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.32■□□□□ 0.36
Rnf38Q8BI21 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf38Q8BI21 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf38Q8BI21 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf38Q8BI21 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf38Q8BI21 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rnf38Q8BI21 Gm6420-201ENSMUST00000193885 723 ntBASIC17.32■□□□□ 0.36
Rnf38Q8BI21 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf38Q8BI21 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf38Q8BI21 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf38Q8BI21 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.32■□□□□ 0.36
Rnf38Q8BI21 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf38Q8BI21 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf38Q8BI21 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms