Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vps13bQ80TY5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vps13bQ80TY5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vps13bQ80TY5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC10.81□□□□□ -0.68
Vps13bQ80TY5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vps13bQ80TY5 Gm43514-201ENSMUST00000198852 424 ntBASIC10.81□□□□□ -0.68
Vps13bQ80TY5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC10.81□□□□□ -0.68
Vps13bQ80TY5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC10.81□□□□□ -0.68
Vps13bQ80TY5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC10.81□□□□□ -0.68
Vps13bQ80TY5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.81□□□□□ -0.68
Vps13bQ80TY5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Vps13bQ80TY5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Vps13bQ80TY5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Vps13bQ80TY5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vps13bQ80TY5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Vps13bQ80TY5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Gm38345-201ENSMUST00000192635 1748 ntBASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Mir1668-201ENSMUST00000184114 107 ntBASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vps13bQ80TY5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Gm27389-201ENSMUST00000183622 195 ntBASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Gm37820-201ENSMUST00000194021 2147 ntBASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
Vps13bQ80TY5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.78□□□□□ -0.68
Vps13bQ80TY5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Gm43347-201ENSMUST00000200226 580 ntBASIC10.78□□□□□ -0.68
Vps13bQ80TY5 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.78□□□□□ -0.68
Vps13bQ80TY5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Birc2-201ENSMUST00000054878 378 ntBASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vps13bQ80TY5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Vps13bQ80TY5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Vps13bQ80TY5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Vps13bQ80TY5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Vps13bQ80TY5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Vps13bQ80TY5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Vps13bQ80TY5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Vps13bQ80TY5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC10.77□□□□□ -0.68
Vps13bQ80TY5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Vps13bQ80TY5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.77□□□□□ -0.68
Vps13bQ80TY5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Vps13bQ80TY5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Vps13bQ80TY5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
Vps13bQ80TY5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms