Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rfx4Q7TNK1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Smad6-203ENSMUST00000179458 273 ntBASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Rfx4Q7TNK1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx4Q7TNK1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx4Q7TNK1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx4Q7TNK1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx4Q7TNK1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rfx4Q7TNK1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.28■□□□□ 0.36
Rfx4Q7TNK1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx4Q7TNK1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx4Q7TNK1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx4Q7TNK1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx4Q7TNK1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx4Q7TNK1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx4Q7TNK1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx4Q7TNK1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfx4Q7TNK1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Gm12251-201ENSMUST00000117893 792 ntBASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Gm43137-201ENSMUST00000198052 594 ntBASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.26■□□□□ 0.35
Rfx4Q7TNK1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx4Q7TNK1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms