Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssx9Q6XAS3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.93■□□□□ 0.46
Ssx9Q6XAS3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ssx9Q6XAS3 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.93■□□□□ 0.46
Ssx9Q6XAS3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ssx9Q6XAS3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ssx9Q6XAS3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssx9Q6XAS3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Gm10849-201ENSMUST00000100397 618 ntBASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Gm26571-201ENSMUST00000181399 666 ntBASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Gm6365-201ENSMUST00000054711 744 ntBASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssx9Q6XAS3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Ssx9Q6XAS3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx9Q6XAS3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.88■□□□□ 0.45
Ssx9Q6XAS3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx9Q6XAS3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx9Q6XAS3 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.87■□□□□ 0.45
Ssx9Q6XAS3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ssx9Q6XAS3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Ssx9Q6XAS3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx9Q6XAS3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx9Q6XAS3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx9Q6XAS3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx9Q6XAS3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx9Q6XAS3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx9Q6XAS3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx9Q6XAS3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms